Tissue Optics

Tissue Absorption

Bulk \(\mu_a(\lambda)\) from chromophore concentrations

Melanin fraction (whole-vol. avg)
Total hemoglobin (μM)
StO₂
Water fraction
Lipid fraction
About

All concentrations are volumetric averages over the full probed tissue volume. The absorption of each chromophore is its concentration multiplied by its extinction coefficient; the total absorption is the sum of these components.

Background

Beer's law chromophore model


The bulk absorption coefficient is the sum of contributions from each chromophore, each following Beer's law:

$$\mu_{a,\text{HbO}_2}(\lambda) = \varepsilon_{\text{HbO}_2}(\lambda)\,[\text{HbT}]\,\text{StO}_2$$

$$\mu_{a,\text{Hb}}(\lambda) = \varepsilon_{\text{Hb}}(\lambda)\,[\text{HbT}]\,(1 - \text{StO}_2)$$

$$\mu_{a,\text{water}}(\lambda) = \varepsilon_{\text{water}}(\lambda)\,W$$

$$\mu_{a,\text{lipid}}(\lambda) = \varepsilon_{\text{lipid}}(\lambda)\,L$$

where \([\text{HbT}]\) is total hemoglobin concentration (μM), \(\text{StO}_2\) is tissue oxygen saturation, \(W\) is water volume fraction, and \(L\) is lipid volume fraction. \(\varepsilon_{\text{HbO}_2}\) and \(\varepsilon_{\text{Hb}}\) have units mm⁻¹ μM⁻¹; \(\varepsilon_{\text{water}}\) and \(\varepsilon_{\text{lipid}}\) have units mm⁻¹ (i.e., these are the absorptions of pure water or pure lipid, respectively).

Melanin absorption follows the power-law fit from Jacques (2013), Eq. 8:

$$\mu_{a,\text{mel}}(\lambda) = M_f \times 51.9 \left(\frac{\lambda}{500\,\text{nm}}\right)^{-3.5} \quad \text{(mm}^{-1}\text{)}$$

where \(M_f\) is the melanosome volume fraction averaged over the full probed tissue volume (n.b., within the epidermis specifically \(M_f\) can reach a value of 0.43).

The total bulk absorption coefficient is:

$$\mu_a(\lambda) = \mu_{a,\text{HbO}_2}(\lambda) + \mu_{a,\text{Hb}}(\lambda) + \mu_{a,\text{water}}(\lambda) + \mu_{a,\text{lipid}}(\lambda) + \mu_{a,\text{mel}}(\lambda)$$

Sources

References


Tissue absorption model originally made for:

Blaney, G., Frias, J., Tavakoli, F., Sassaroli, A., and Fantini, S. "Dual-ratio approach to pulse oximetry and the effect of skin tone." J. Biomed. Opt. 29(S3), S33311 (2024). doi:10.1117/1.JBO.29.S3.S33311

Primary sources for extinction coefficients:

  1. Prahl, S. "Tabulated Molar Extinction Coefficient for Hemoglobin in Water." Data from W.B. Gratzer (MRC Labs, London) and N. Kollias (Wellman Labs, Harvard). omlc.org/spectra/hemoglobin/summary.html
  2. Pope, R.M. "Optical absorption of pure water and sea water using the integrating cavity absorption meter," Texas A&M University (1993); Kou, L., Labrie, D., and Chylek, P. "Refractive indices of water and ice in the 0.65–2.5 μm spectral range," Appl. Opt. 32, 3531–3540 (1993).
  3. van Veen, R.L.P., Sterenborg, H.J.C.M., Pifferi, A., Torricelli, A., and Cubeddu, R. "Determination of VIS-NIR absorption coefficients of mammalian fat, with time- and spatially resolved diffuse reflectance and transmission spectroscopy." OSA Annual BIOMED Topical Meeting (2004).
  4. Jacques, S.L. "Optical properties of biological tissues: a review." Phys. Med. Biol. 58, R37–R61 (2013). doi:10.1088/0031-9155/58/11/r37